This is an old revision of cBrother
from 2006-06-28 05:37:43.
is software for inferring recombination when recombination is rare. This is a C version of the code originally written in Java and available elsewhere (http://www.biomath.medsch.ucla.edu/msuchard/)
- About 20 time faster than the java version
- Estimate recombination using the single multiple change point (SMCP) model Citation ref4 not found!.
- Estimate recombination using the dual multiple change point (DMCP) model Citation ref2 not found!.
- Test recombinants with similar mosaic structure (e.g. circulating recombinant forms) for evidence that they result from multiple recombination events, rather than a single recombination event Citation ref1 not found!.
- Option of relaxing fixed parental relationships.